Other Research Outputs

Not everything I’ve put out into the world shows up on ORCID or Google Scholar. This page collects posters, conference slides, and training materials/datasets deposited on F1000Research and Zenodo. For peer-reviewed journal articles, see my Publications page. Last updated July 2026.

Posters & Slides

• Freeberg MA, Bahena S, Curwin A, D’Altri T, Rambla J, Keane T. Federated EGA: A global network for discovery and access of sensitive human data [poster]. Presented at the International Congress of Human Genetics, 2023. F1000Research 2023, 12(ELIXIR):1532. doi: 10.7490/f1000research.1119669.1

• Curwin A, D’Altri T, Freeberg M, Jené A, Petersen K, Kalliokoski L. Demonstrating federated EGA services for sensitive data discovery & access [slides]. Presented at ELIXIR All Hands 2023. F1000Research 2023, 12(ELIXIR):638. doi: 10.7490/f1000research.1119478.1

• Freeberg M, Curwin A. Federated EGA Updates in 2022 [slides]. Presented at ELIXIR All Hands 2022. F1000Research 2022, 11(ELIXIR):623. doi: 10.7490/f1000research.1118988.1

• Freeberg M, Taylor J. Approaches for small RNA-seq in Galaxy [slides]. Presented at Galaxy Community Conference 2017. F1000Research 2017, 6:1137. doi: 10.7490/f1000research.1114423.1

• Turaga N, Freeberg MA. BioinforMagic: Marrying Galaxy and Bioconductor [slides]. Presented at Galaxy Community Conference 2016. F1000Research 2016, 5:2056. doi: 10.7490/f1000research.1112904.1

Training Materials & Datasets

• Freeberg, Mallory. WEBINAR: Global data resources for human genomics and health. Slides from the Australian BioCommons webinar, 20 September 2024. Zenodo. doi: 10.5281/zenodo.13845933

• Freeberg, Mallory. Training material for Galaxy 101 tutorial. Zenodo, 2020. doi: 10.5281/zenodo.4104428

• Batut B, Videm P, Erxleben A, Grüning B, Freeberg, Mallory, Heydarian M, Blank C, Doyle M, Soranzo N, van Heusden P, Delisle L. Reference-based RNA-seq data analysis (training data). Zenodo, 2018. doi: 10.5281/zenodo.6457007

• Mei H, Freeberg, Mallory, Taylor J, Nekrutenko A. Sample datasets for E. coli C-1 genome assembly tutorial. Zenodo, 2017. doi: 10.5281/zenodo.940733

• Freeberg, Mallory, Heydarian M. Training material for ChIP-seq analysis. Zenodo, 2016. doi: 10.5281/zenodo.197100

Training Courses & Curricula

• Alasoo K, Alonso Ayuso A, Freeberg M, Fromont L, García Lezana T, Goisauf M, Hiltemann S, Keane T, Linden M, Lloret Llinares M, Milla Martín G, Rial-Sebbag E, Thomas Lopez D. Federated data analysis: From finding data to data analysis following FAIR principles. European Bioinformatics Institute (EMBL-EBI), 2023. doi: 10.6019/tol.federateddata-t.2023.00001.1